https://flmnh-ai.r-universe.devRecent package updates in flmnh-aiR-universehttps://github.com/flmnh-ai.pnghttps://flmnh-ai.r-universe.devWed, 03 Jun 2026 20:19:35 GMTnicolas.gauthier@ufl.edu (Nick Gauthier)A toolkit for plague transmission modeling using stochastic compartmental models. Implements carcass-based transmission dynamics (Didelot et al. 2017) with spatial structure and multi-host dynamics for epidemiological research.https://github.com/r-universe/flmnh-ai/actions/runs/26915925954Wed, 03 Jun 2026 20:19:35 GMTyersinia0.1.0failurehttps://flmnh-ai.r-universe.devhttps://github.com/flmnh-ai/yersinianicolas.gauthier@ufl.edu (Nicolas Gauthier)Automated petrographic analysis of thin section images using deep learning models. Provides tools for training RF-DETR detection and segmentation models, running predictions with SAHI (Slicing Aided Hyper Inference), calculating morphological properties, and analyzing results. Supports both local and HPC training workflows with seamless R-Python integration via reticulate.https://github.com/r-universe/flmnh-ai/actions/runs/26218769776Tue, 21 Apr 2026 17:27:24 GMTpetrographer0.0.0.9000successhttps://flmnh-ai.r-universe.devhttps://github.com/flmnh-ai/petrographeranalyzing-predictions.qmdanalyzing-predictions.htmlAnalyzing Predictions2026-04-21 15:53:562026-04-21 15:53:56training-models.qmdtraining-models.htmlTraining Custom Models2025-10-14 01:04:272026-04-21 15:53:56whole-slide-basics.qmdwhole-slide-basics.htmlWhole-Slide Prediction Basics2025-10-14 01:04:272026-04-21 15:53:56nicolas.gauthier@ufl.edu (Nicolas Gauthier)An R package for conducting empirical orthogonal function (EOF) analysis in the tidyverse framework. Functions to isolate modes of variability from spatiotemporal data, run various diagnostics, and use these patterns for spatial downscaling via canonical correlation analysis.https://github.com/r-universe/flmnh-ai/actions/runs/26559632958Wed, 25 Feb 2026 21:56:49 GMTtidyeof0.1.0successhttps://flmnh-ai.r-universe.devhttps://github.com/nick-gauthier/tidyeofcross-validation.qmdcross-validation.htmlCross-Validation and Tuning2026-02-25 21:02:142026-02-25 21:02:14eof-analysis.qmdeof-analysis.htmlEOF Analysis with tidyeof2026-02-25 21:02:142026-02-25 21:02:14downscaling.qmddownscaling.htmlStatistical Downscaling with CCA2026-02-25 21:02:142026-02-25 21:02:14nicolas.gauthier@ufl.edu (Nicolas Gauthier)A lightweight vector database for storing and querying embeddings within the tidyverse framework. Supports multimodal (text and image) embeddings, nearest neighbor search, and visualization, all with a tidyverse-friendly API.https://github.com/r-universe/flmnh-ai/actions/runs/25844171071Thu, 16 Oct 2025 00:36:01 GMTtidyvec0.1.0successhttps://flmnh-ai.r-universe.devhttps://github.com/flmnh-ai/tidyvecgetting-started.Rmdgetting-started.htmlGetting Started with TidyVec2025-02-25 18:49:182025-10-16 00:29:21nicolas.gauthier@ufl.edu (Nicolas Gauthier)Simple interface for submitting and managing SLURM jobs on the University of Florida HiPerGator cluster. Provides authentication, data transfer, job submission, monitoring, and result retrieval with configuration management for streamlined workflows.https://github.com/r-universe/flmnh-ai/actions/runs/25987563840Tue, 14 Oct 2025 01:20:49 GMThipergator0.1.0successhttps://flmnh-ai.r-universe.devhttps://github.com/flmnh-ai/hipergator